read-dicom-seg.md

+
+
+
+## Name
+Read DICOM-Seg File
+
+## Description
+This example creates a Hero Imaging workflow that read segmentation from a *DICOM-Seg* file format and presents it as Hero Imaging *Mask*. The workflow is created using a Hero Imaging Plugin node implemented in python programming language
+
+| Node name | Workflow Purpose|
+| ------ | ------ |
+| DICOM-Seg to Mask | Presents segmentations from a *DICOM-Seg* file as Hero Imaging *Mask*|
+
+## Visuals
+
+![Read DICOM-Seg File](https://git.cardiff.ac.uk./OyiboP/hero-imaging-workflows/-/raw/main/example_workflows/read_dicom_seg/read_dicom_seg.png?ref_type=heads)
+
+
+## Getting Started
+
+The following instructions will get Simple Radiomics workflow up and running on your Windows machine.
+
+1. Start Hero Imaging. From the windows desktop or start menu
+2. Open Existing Hero Imaging Workflow. From the **File** menu, select *Open*. Browse and select the *read_dicom_seg.ice* file in the **Open** window, click **Open**. 
+3. In the **Settings** panel, change **File** parameter value to the file path of the example *DICOM-Seg* file. Browse and select your *dicom_seg_example* file in the **Select file** window, Click **Open**. 
+4. Click *Start* button to run the workflow
+
+## Required Files
+- [Example *DICOM_Seg* file](https://git.cardiff.ac.uk./OyiboP/hero-imaging-workflows/-/blob/main/example_workflows/read_dicom_seg/dicom_seg_example.dcm?ref_type=heads)
+- [Read DICOM_Seg Workflow](https://git.cardiff.ac.uk./OyiboP/hero-imaging-workflows/-/blob/main/example_workflows/read_dicom_seg/read_dicom_seg.ice?ref_type=heads)
+
+## Prerequisite python libraries
+- heropytools
+- pydicom==2.4.4
+- pydicom-seg==0.4.1
+
+
+
+
+