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adding files for SWI analysis - initial commit
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DownloadData
SWI_SEPIA
README.md
README.md

Analysis scripts for Brain and Genomics (SW2) Hub

Carolyn McNabb Last updated: September 2024

Here, you will find scripts and instructions for analysing MRI data for the Brain and Genomics Hub study.

Downloading MRI data from XNAT

First, you'll need to download the MRI data from XNAT. To do this, use the scripts in the DownloadData folder.

DICOM to BIDS conversion

Once data are downloaded, you can convert the DICOM files to NifTI format and arrange these according to the Brain Imaging Data Structure (BIDS). To do this, use the scripts in the DownloadData folder.