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Commit 0c06ab2f authored by Carolyn McNabb's avatar Carolyn McNabb
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# Analysis scripts for Brain and Genomics (SW<sup>2</sup>) Hub
**Carolyn McNabb**</br>
Last updated: September 2024
**Here, you will find scripts and instructions for analysing MRI data for the Brain and Genomics Hub study.**
## Downloading MRI data from XNAT
First, you'll need to download the MRI data from XNAT. To do this, use the scripts in the `DownloadData` folder.
## DICOM to BIDS conversion
Once data are downloaded, you can convert the DICOM files to NifTI format and arrange these according to the Brain Imaging Data Structure ([BIDS](https://bids-specification.readthedocs.io/en/stable/)). To do this, use the scripts in the `DownloadData` folder.
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